##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ViralProj14703 #!genome-build-accession NCBI_Assembly:GCF_000848505.1 ##sequence-region NC_002549.1 1 18959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=186538 NC_002549.1 RefSeq region 1 18959 . + . ID=NC_002549.1:1..18959;Dbxref=taxon:186538;gbkey=Src;genome=genomic;isolate=Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga;mol_type=viral cRNA NC_002549.1 RefSeq five_prime_UTR 1 55 . + . ID=id-NC_002549.1:1..55;Note=leader region;function=regulation or initiation of RNA replication;gbkey=5'UTR NC_002549.1 RefSeq gene 56 3026 . + . ID=gene-ZEBOVgp1;Dbxref=GeneID:911830;Name=NP;gbkey=Gene;gene=NP;gene_biotype=protein_coding;locus_tag=ZEBOVgp1 NC_002549.1 RefSeq mRNA 56 3026 . + . ID=rna-ZEBOVgp1;Parent=gene-ZEBOVgp1;Dbxref=GeneID:911830;gbkey=mRNA;gene=NP;locus_tag=ZEBOVgp1;product=nucleoprotein NC_002549.1 RefSeq exon 56 3026 . + . ID=exon-ZEBOVgp1-1;Parent=rna-ZEBOVgp1;Dbxref=GeneID:911830;gbkey=mRNA;gene=NP;locus_tag=ZEBOVgp1;product=nucleoprotein NC_002549.1 RefSeq CDS 470 2689 . + 0 ID=cds-NP_066243.1;Parent=rna-ZEBOVgp1;Dbxref=GenBank:NP_066243.1,GeneID:911830;Name=NP_066243.1;gbkey=CDS;gene=NP;locus_tag=ZEBOVgp1;product=nucleoprotein;protein_id=NP_066243.1 NC_002549.1 RefSeq regulatory_region 56 67 . + . ID=id-ZEBOVgp1;Parent=gene-ZEBOVgp1;Dbxref=GeneID:911830;Note=putative%3B transcription start signal;gbkey=regulatory;gene=NP;locus_tag=ZEBOVgp1;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 3015 3026 . + . ID=id-ZEBOVgp1-2;Parent=gene-ZEBOVgp1;Dbxref=GeneID:911830;gbkey=regulatory;gene=NP;locus_tag=ZEBOVgp1;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq sequence_feature 3027 3031 . + . ID=id-NC_002549.1:3027..3031;Note=intergenic region;gbkey=misc_feature NC_002549.1 RefSeq gene 3032 4407 . + . ID=gene-ZEBOVgp2;Dbxref=GeneID:911827;Name=VP35;gbkey=Gene;gene=VP35;gene_biotype=protein_coding;locus_tag=ZEBOVgp2 NC_002549.1 RefSeq mRNA 3032 4407 . + . ID=rna-ZEBOVgp2;Parent=gene-ZEBOVgp2;Dbxref=GeneID:911827;gbkey=mRNA;gene=VP35;locus_tag=ZEBOVgp2;product=VP35 NC_002549.1 RefSeq exon 3032 4407 . + . ID=exon-ZEBOVgp2-1;Parent=rna-ZEBOVgp2;Dbxref=GeneID:911827;gbkey=mRNA;gene=VP35;locus_tag=ZEBOVgp2;product=VP35 NC_002549.1 RefSeq CDS 3129 4151 . + 0 ID=cds-NP_066244.1;Parent=rna-ZEBOVgp2;Dbxref=GenBank:NP_066244.1,GeneID:911827;Name=NP_066244.1;gbkey=CDS;gene=VP35;locus_tag=ZEBOVgp2;product=polymerase complex protein;protein_id=NP_066244.1 NC_002549.1 RefSeq regulatory_region 3032 3043 . + . ID=id-ZEBOVgp2;Parent=gene-ZEBOVgp2;Dbxref=GeneID:911827;Note=putative%3B transcription start signal;gbkey=regulatory;gene=VP35;locus_tag=ZEBOVgp2;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 4397 4407 . + . ID=id-ZEBOVgp2-2;Parent=gene-ZEBOVgp2;Dbxref=GeneID:911827;gbkey=regulatory;gene=VP35;locus_tag=ZEBOVgp2;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq gene 4390 5894 . + . ID=gene-ZEBOVgp3;Dbxref=GeneID:911825;Name=VP40;gbkey=Gene;gene=VP40;gene_biotype=protein_coding;locus_tag=ZEBOVgp3 NC_002549.1 RefSeq mRNA 4390 5894 . + . ID=rna-ZEBOVgp3;Parent=gene-ZEBOVgp3;Dbxref=GeneID:911825;gbkey=mRNA;gene=VP40;locus_tag=ZEBOVgp3;product=VP40 NC_002549.1 RefSeq exon 4390 5894 . + . ID=exon-ZEBOVgp3-1;Parent=rna-ZEBOVgp3;Dbxref=GeneID:911825;gbkey=mRNA;gene=VP40;locus_tag=ZEBOVgp3;product=VP40 NC_002549.1 RefSeq CDS 4479 5459 . + 0 ID=cds-NP_066245.1;Parent=rna-ZEBOVgp3;Dbxref=GenBank:NP_066245.1,GeneID:911825;Name=NP_066245.1;gbkey=CDS;gene=VP40;locus_tag=ZEBOVgp3;product=matrix protein;protein_id=NP_066245.1 NC_002549.1 RefSeq regulatory_region 4390 4401 . + . ID=id-ZEBOVgp3;Parent=gene-ZEBOVgp3;Dbxref=GeneID:911825;Note=transcription start signal;gbkey=regulatory;gene=VP40;locus_tag=ZEBOVgp3;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 5883 5894 . + . ID=id-ZEBOVgp3-2;Parent=gene-ZEBOVgp3;Dbxref=GeneID:911825;gbkey=regulatory;gene=VP40;locus_tag=ZEBOVgp3;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq sequence_feature 5895 5899 . + . ID=id-NC_002549.1:5895..5899;Note=intergenic region;gbkey=misc_feature NC_002549.1 RefSeq gene 5900 8305 . + . ID=gene-ZEBOVgp4;Dbxref=GeneID:911829;Name=GP;gbkey=Gene;gene=GP;gene_biotype=protein_coding;locus_tag=ZEBOVgp4 NC_002549.1 RefSeq CDS 6039 6923 . + 0 ID=cds-NP_066246.1;Parent=gene-ZEBOVgp4;Dbxref=GenBank:NP_066246.1,GeneID:911829;Name=NP_066246.1;Note=virion spike glycoprotein precursor%3B an additional A residue is inserted during transcription%3B encodes two disulfide linked subunits GP1 and GP2;exception=RNA editing;gbkey=CDS;gene=GP;locus_tag=ZEBOVgp4;product=spike glycoprotein;protein_id=NP_066246.1 NC_002549.1 RefSeq CDS 6923 8068 . + 0 ID=cds-NP_066246.1;Parent=gene-ZEBOVgp4;Dbxref=GenBank:NP_066246.1,GeneID:911829;Name=NP_066246.1;Note=virion spike glycoprotein precursor%3B an additional A residue is inserted during transcription%3B encodes two disulfide linked subunits GP1 and GP2;exception=RNA editing;gbkey=CDS;gene=GP;locus_tag=ZEBOVgp4;product=spike glycoprotein;protein_id=NP_066246.1 NC_002549.1 RefSeq CDS 6039 6922 . + 0 ID=cds-NP_066248.1;Parent=gene-ZEBOVgp4;Dbxref=GenBank:NP_066248.1,GeneID:911829;Name=NP_066248.1;Note=second non-structural secreted glycoprotein%3B super small secreted glycoprotein%3B secreted in a monomeric form%3B one A residue is deleted or two additional A residues are inserted at the editing site during transcription of the GP gene;exception=RNA editing;gbkey=CDS;gene=GP;locus_tag=ZEBOVgp4;product=second secreted glycoprotein;protein_id=NP_066248.1 NC_002549.1 RefSeq CDS 6924 6933 . + 1 ID=cds-NP_066248.1;Parent=gene-ZEBOVgp4;Dbxref=GenBank:NP_066248.1,GeneID:911829;Name=NP_066248.1;Note=second non-structural secreted glycoprotein%3B super small secreted glycoprotein%3B secreted in a monomeric form%3B one A residue is deleted or two additional A residues are inserted at the editing site during transcription of the GP gene;exception=RNA editing;gbkey=CDS;gene=GP;locus_tag=ZEBOVgp4;product=second secreted glycoprotein;protein_id=NP_066248.1 NC_002549.1 RefSeq mRNA 5900 8305 . + . ID=rna-ZEBOVgp4;Parent=gene-ZEBOVgp4;Dbxref=GeneID:911829;Note=unedited mRNA;gbkey=mRNA;gene=GP;locus_tag=ZEBOVgp4;product=sGP NC_002549.1 RefSeq exon 5900 8305 . + . ID=exon-ZEBOVgp4-1;Parent=rna-ZEBOVgp4;Dbxref=GeneID:911829;Note=unedited mRNA;gbkey=mRNA;gene=GP;locus_tag=ZEBOVgp4;product=sGP NC_002549.1 RefSeq CDS 6039 7133 . + 0 ID=cds-NP_066247.1;Parent=rna-ZEBOVgp4;Dbxref=GenBank:NP_066247.1,GeneID:911829;Name=NP_066247.1;Note=sGP%2C small non-structural%2C secreted glycoprotein%3B sGP secreted as an anti-parallel oriented homodimer;gbkey=CDS;gene=GP;locus_tag=ZEBOVgp4;product=small secreted glycoprotein;protein_id=NP_066247.1 NC_002549.1 RefSeq regulatory_region 5900 5911 . + . ID=id-ZEBOVgp4;Parent=gene-ZEBOVgp4;Dbxref=GeneID:911829;Note=putative%3B transcription start signal;gbkey=regulatory;gene=GP;locus_tag=ZEBOVgp4;regulatory_class=other NC_002549.1 RefSeq regulatory_region 6918 6924 . + . ID=id-ZEBOVgp4-2;Parent=gene-ZEBOVgp4;Dbxref=GeneID:911829;Note=additional A residues are inserted or deleted during transcription of the GP gene by the viral polymerase;function=RNA editing;gbkey=regulatory;gene=GP;locus_tag=ZEBOVgp4;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 8295 8305 . + . ID=id-ZEBOVgp4-3;Parent=gene-ZEBOVgp4;Dbxref=GeneID:911829;gbkey=regulatory;gene=GP;locus_tag=ZEBOVgp4;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq gene 8288 9740 . + . ID=gene-ZEBOVgp5;Dbxref=GeneID:911826;Name=VP30;gbkey=Gene;gene=VP30;gene_biotype=protein_coding;locus_tag=ZEBOVgp5 NC_002549.1 RefSeq mRNA 8288 9740 . + . ID=rna-ZEBOVgp5;Parent=gene-ZEBOVgp5;Dbxref=GeneID:911826;gbkey=mRNA;gene=VP30;locus_tag=ZEBOVgp5;product=VP30 NC_002549.1 RefSeq exon 8288 9740 . + . ID=exon-ZEBOVgp5-1;Parent=rna-ZEBOVgp5;Dbxref=GeneID:911826;gbkey=mRNA;gene=VP30;locus_tag=ZEBOVgp5;product=VP30 NC_002549.1 RefSeq CDS 8509 9375 . + 0 ID=cds-NP_066249.1;Parent=rna-ZEBOVgp5;Dbxref=GenBank:NP_066249.1,GeneID:911826;Name=NP_066249.1;Note=polymerase complex protein;gbkey=CDS;gene=VP30;locus_tag=ZEBOVgp5;product=minor nucleoprotein;protein_id=NP_066249.1 NC_002549.1 RefSeq regulatory_region 8288 8299 . + . ID=id-ZEBOVgp5;Parent=gene-ZEBOVgp5;Dbxref=GeneID:911826;Note=putative%3B transcription start signal;gbkey=regulatory;gene=VP30;locus_tag=ZEBOVgp5;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 9730 9740 . + . ID=id-ZEBOVgp5-2;Parent=gene-ZEBOVgp5;Dbxref=GeneID:911826;Note=putative;gbkey=regulatory;gene=VP30;locus_tag=ZEBOVgp5;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq sequence_feature 9741 9884 . + . ID=id-NC_002549.1:9741..9884;Note=intergenic region;gbkey=misc_feature NC_002549.1 RefSeq gene 9885 11518 . + . ID=gene-ZEBOVgp6;Dbxref=GeneID:911828;Name=VP24;Note=putative;gbkey=Gene;gene=VP24;gene_biotype=protein_coding;locus_tag=ZEBOVgp6 NC_002549.1 RefSeq mRNA 9885 11496 . + . ID=rna-ZEBOVgp6;Parent=gene-ZEBOVgp6;Dbxref=GeneID:911828;gbkey=mRNA;gene=VP24;locus_tag=ZEBOVgp6;product=VP24 NC_002549.1 RefSeq exon 9885 11496 . + . ID=exon-ZEBOVgp6-1;Parent=rna-ZEBOVgp6;Dbxref=GeneID:911828;gbkey=mRNA;gene=VP24;locus_tag=ZEBOVgp6;product=VP24 NC_002549.1 RefSeq CDS 10345 11100 . + 0 ID=cds-NP_066250.1;Parent=rna-ZEBOVgp6;Dbxref=GenBank:NP_066250.1,GeneID:911828;Name=NP_066250.1;gbkey=CDS;gene=VP24;locus_tag=ZEBOVgp6;product=membrane-associated protein;protein_id=NP_066250.1 NC_002549.1 RefSeq sequence_feature 11497 11500 . + . ID=id-ZEBOVgp6;Dbxref=GeneID:911828;Note=intergenic region;gbkey=misc_feature;gene=VP24;locus_tag=ZEBOVgp6 NC_002549.1 RefSeq regulatory_region 9885 9896 . + . ID=id-ZEBOVgp6-2;Parent=gene-ZEBOVgp6;Dbxref=GeneID:911828;Note=transcription start signal;gbkey=regulatory;gene=VP24;locus_tag=ZEBOVgp6;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 11485 11496 . + . ID=id-ZEBOVgp6-3;Parent=gene-ZEBOVgp6;Dbxref=GeneID:911828;Note=putative;gbkey=regulatory;gene=VP24;locus_tag=ZEBOVgp6;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq polyA_signal_sequence 11508 11518 . + . ID=id-ZEBOVgp6-4;Parent=gene-ZEBOVgp6;Dbxref=GeneID:911828;gbkey=regulatory;gene=VP24;locus_tag=ZEBOVgp6;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq gene 11501 18282 . + . ID=gene-ZEBOVgp7;Dbxref=GeneID:911824;Name=L;gbkey=Gene;gene=L;gene_biotype=protein_coding;locus_tag=ZEBOVgp7 NC_002549.1 RefSeq mRNA 11501 18282 . + . ID=rna-ZEBOVgp7;Parent=gene-ZEBOVgp7;Dbxref=GeneID:911824;gbkey=mRNA;gene=L;locus_tag=ZEBOVgp7;product=polymerase NC_002549.1 RefSeq exon 11501 18282 . + . ID=exon-ZEBOVgp7-1;Parent=rna-ZEBOVgp7;Dbxref=GeneID:911824;gbkey=mRNA;gene=L;locus_tag=ZEBOVgp7;product=polymerase NC_002549.1 RefSeq CDS 11581 18219 . + 0 ID=cds-NP_066251.1;Parent=rna-ZEBOVgp7;Dbxref=GenBank:NP_066251.1,GeneID:911824;Name=NP_066251.1;gbkey=CDS;gene=L;locus_tag=ZEBOVgp7;product=RNA-dependent RNA polymerase;protein_id=NP_066251.1 NC_002549.1 RefSeq regulatory_region 11501 11512 . + . ID=id-ZEBOVgp7;Parent=gene-ZEBOVgp7;Dbxref=GeneID:911824;Note=transcription start signal;gbkey=regulatory;gene=L;locus_tag=ZEBOVgp7;regulatory_class=other NC_002549.1 RefSeq polyA_signal_sequence 18272 18282 . + . ID=id-ZEBOVgp7-2;Parent=gene-ZEBOVgp7;Dbxref=GeneID:911824;gbkey=regulatory;gene=L;locus_tag=ZEBOVgp7;regulatory_class=polyA_signal_sequence NC_002549.1 RefSeq three_prime_UTR 18283 18959 . + . ID=id-NC_002549.1:18283..18959;Note=trailer region;function=regulation or initiation of RNA replication;gbkey=3'UTR ###