New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	= 16976	0 (0.000)	6 (0.680)	6/46	NT	100%	intergenic (‑75/‑512)	mokC/nhaA	type I toxin‑antitoxin system toxin MokC/Na+/H+ antiporter NhaA
	?	NC_012967	= 590469	NA (NA)					intergenic (+24/‑74)	ECB_RS24845/hokE	IS3 family transposase/type I toxin‑antitoxin system toxin HokE

TGTGTTCAGCATATAGGGGGCCTCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/16947‑16976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  <  NC_012967/590469‑590435                                                                   TGTGTTCAGCATATAGGGGGCCTCGGGTTGTACTGA                               <  2:464831/36‑1  GTGTTCAGCATATAGGGGGCCTCGGGTTGTACTGAC                              >  1:260324/1‑36      TCAGCATATAGGGGGCCTCGGGTTGTACTGACCCCA                          <  2:594939/36‑1       CAGCATATAGGGGGCCTCGGGTTGTACTGACCCCAA                         >  1:97758/1‑36                      CTCGGGTTGTACTGACCCCAAAAAGTTGAACAGTTA          >  2:814709/1‑36                       TCGGGTTGTACTGACCCCAAAAAGTTGGACAGTTAA         >  1:812306/1‑36                        CGGGTTGTACTGACCCCAAAAAGTTGGACAGTTAAA        <  1:466506/36‑1                          GGTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA      <  2:31727/36‑1                              GTACTGACCCCAAAAAGTTGGACAGTTAAATACGAG  >  1:557980/1‑36                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  <  2:146077/36‑1                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  >  1:595800/1‑36                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  <  1:570019/36‑1                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  >  1:521239/1‑36                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  >  1:706402/1‑36                              GTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  <  2:259282/36‑1                                                                   TGTGTTCAGCATATAGGGGGCCTCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/16947‑16976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGACCCCAAAAAGTTGGACAGTTAAACACGAG  <  NC_012967/590469‑590435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.