Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_012967	2031681–2031702	2054967–2054947	23246–23287	2 [0]	[1] 2	[cpsG]–[cpsG]	[cpsG],ECB_RS10255,ECB_RS10260,wbbD,ECB_RS10270,wzy,ECB_RS10280,ECB_RS10285,vioB,vioA,wzx,rfbC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,[cpsG]

CGGGGTGCGCCAGTTTGCTGTTGATCTCACCGCTTG  >  NC_012967/2031645‑2031680                                    | cGGGGTGCGCCAGTTTGCTGTTGATCTCACCGCTTg  >  1:809513/1‑36 (MQ=255) cGGGGTGCGCCAGTTTGCTGTTGATCTCACCGCTTg  <  2:117141/36‑1 (MQ=255)                                    | CGGGGTGCGCCAGTTTGCTGTTGATCTCACCGCTTG  >  NC_012967/2031645‑2031680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑