Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_012967	1	3	3	NA [0]	[1] 2	–/thrL	–/thr operon leader peptide

GCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGT  >  NC_012967/2‑39   |                                    gCTTTTCATTCTGACTGCAACGGGCAATATGTctct    >  2:354257/1‑36 (MQ=255)   ttttCATTCTGACTGCAACGGGCAATATGTCTCtgt  <  1:293844/36‑1 (MQ=255)   |                                    GCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGT  >  NC_012967/2‑39

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑