Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_012967 | 2,082,685 | G→A | 100% | A494V (GCT→GTT) | yegI ← | protein kinase YegI |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_012967 | 2,082,685 | 0 | G | A | 100.0% | 13.8 / NA | 7 | A494V (GCT→GTT) | yegI | protein kinase YegI |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/2); total (5/2) | |||||||||||
Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
TCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCG > NC_012967/2082655‑2082703 | acccTTGCGGTGTCGTGAAGTGCTGCCAGAACACGt > 2:962443/2‑36 (MQ=38) cTTGCGGTGTATTGAAGTGCTGCCAGAACACGtttt < 2:202700/36‑1 (MQ=19) cGGTGTCGTGAAGTGCTGCCAGAACACGTTTttctt > 1:657407/1‑36 (MQ=38) ggTGTCGTGAAGTGCTGCCAGAACACGTTTttcttc > 2:610749/1‑36 (MQ=38) gtCGTGGAGTGCTGCCAGGACACGTTTTTCTtcctc < 1:749567/36‑1 (MQ=19) gtCGTGAAGTGCTGCCAGAACACGTTTTTCTtcctc > 2:600226/1‑36 (MQ=38) cGTGAAGTGCTGCCAGAACACGTTTTTCTTCCTCCg > 1:841856/1‑36 (MQ=38) | TCCCTTGCGGTGTCGTGAAGTGCTGCCAGAGCACGTTTTTCTTCCTCCG > NC_012967/2082655‑2082703 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |