New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	16972 =	0 (0.000)	9 (0.940)	3/50	NT	100%	intergenic (‑71/‑516)	mokC/nhaA	type I toxin‑antitoxin system toxin MokC/Na+/H+ antiporter NhaA
	?	NC_012967	588495 =	NA (NA)					intergenic (‑222/‑47)	ybdK/ECB_RS24840	YbdK family carboxylate‑amine ligase/IS3‑like element IS150 family transposase

AGAGAAAAGCCCCGAGTGATATTTTACTATCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/17006‑16972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAAT  >  NC_012967/588495‑588526                                                                     AGAGAAAAGCCCCGAGTGATATTTTACTATCAACCT                                 >  1:50335/1‑36 AGAGAAAAGCCCCGAGTGATATTTTACTATCAACCT                                 >  2:208611/1‑36   AGAAAAGCCCCGAGTGATATTTTACTATCAACCTGT                               >  1:922425/1‑36     AAAAGCCCCGAGTGATATTTTACTATCAACCTGTAC                             >  1:857310/1‑36               AGTGATATTTTACTATCAACCTGTACTGCACCCATT                   >  1:270010/1‑36                GTGATATTTTACTATCAACCTGTACCGCACCCATct                  >  1:558839/1‑34                    TATTTTACTATCAACCTGTACTGCACCCATTTTGTT              >  1:125870/1‑36                    TATTTTACTATCAACCTGTACTGCACCCATTTTGTT              <  1:73612/36‑1                           CTATCAACCTGTACTGCACCCATTTTGTTGGACGAT       >  1:984453/1‑36                           CTATCAACCTGTACTGCACCCATTTTGTTGGACGAT       >  2:735209/1‑36                           CTATCAACCTGTACTGCACCCATTTTGTCGCACGAT       >  2:833501/1‑36                            TATCAACCTGTACTGCACCCATTTTGTTGGACGATG      <  2:125881/36‑1                              TCAACCTGTACTGCACCCATTTTGTTGGACGATGAA    >  1:744184/1‑36                               CAACCTGTACTGCACCCATTTTGTTGGACGATGAAA   >  2:167270/1‑36                                AACCTGTACTGCACCCATTTTGTTGGACGATGTAAT  >  2:925445/1‑36                                                                     AGAGAAAAGCCCCGAGTGATATTTTACTATCAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/17006‑16972 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAAT  >  NC_012967/588495‑588526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.