BRESEQ :: Evidence
New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 589884 =NA (NA)4 (0.450) 3/46 NT NA pseudogene (384/698 nt) ECB_RS23205 IS1 family transposase
?NC_012967 = 590469 NA (NA)intergenic (+24/‑74) ECB_RS24845/hokE IS3 family transposase/type I toxin‑antitoxin system toxin HokE

GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/589920‑589884
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGACCCCAAAAAGTTGGACAGTTAAACA  <  NC_012967/590469‑590439
                                                                    
tCTAAATCGCGCCAGCTCTGGCTGTTTTACGCGTAT                                  <  1:482160/35‑1
gtTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  1:817986/34‑1
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  1:696479/36‑1
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  1:396906/36‑1
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  1:897801/36‑1
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  2:369870/36‑1
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  2:20968/36‑1
GCTAAACCGCGCCAGCGCTGGCTGTTTTACGCGTAT                                  <  1:239609/36‑1
 caAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  1:190962/34‑1
 aTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  2:609887/35‑1
 CTAAATCGCGCCCGCGCTGGCTGTTTTACGCGTATG                                 >  2:385010/1‑36
 CTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  2:659681/36‑1
 CTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  1:701037/36‑1
 CTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  2:366748/36‑1
 CTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  1:413435/36‑1
 CTAAATCGCGCCAGCGCTGGCTGTTTTACGCCTATG                                 >  1:758541/1‑36
 CTAAATCACGCCAGCGCTGGCTGTTTTACGCGTATG                                 <  1:851800/36‑1
    AATCGCGCCAGCGCTGGCTGGTTTACGCGTATGTAa                              >  1:130144/1‑35
                    GCTGTTTTACGCGTATGTACTGACCCCAAAAAGTTG              <  1:620173/36‑1
                      TGTTTTACGCGTATGTACTGACCCCAAAAAGTTGGA            >  1:915481/1‑36
                          TTACGCGTGTGTACTGACCCCCAAAAGTTGGACAGT        >  2:690904/1‑36
                          TTACGCGTATGTACTGACCCCAAAAAGTTGGACAct        >  1:785057/1‑34
                                GTATGTACTGACCCCAAAAAGTTGGACAGTTAAACA  >  2:591026/1‑36
                                GTATGTACTGACCCCAAAAAGTTGGACAGTTAAACA  <  1:635345/36‑1
                                                                    
GCTAAATCGCGCCAGCGCTGGCTGTTTTACGCGTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/589920‑589884
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGACCCCAAAAAGTTGGACAGTTAAACA  <  NC_012967/590469‑590439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.