BRESEQ :: Evidence
New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 1733645 =0 (0.000)14 (1.580) 13/46 NT 100% coding (681/1413 nt) pykF pyruvate kinase PykF
?NC_012967 = 2775875 NA (NA)intergenic (‑45/+204) ECB_RS25125/cysH IS3 family transposase/phosphoadenosine phosphosulfate reductase

GCCGTCAGAGGCTTCGAGGATTTCGTCGAAGTTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1733681‑1733645
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < NC_012967/2775875‑2775841

GCCGTCAGAGGCTTCGAGGATTTCGTCGAAGTTGTT < 2:95388/36‑1
GTCAGAGGCTTCGAGGATTTCGTCGAAGTTGTTtta > 2:154502/1‑33
TCAGAGGCTTCGAGGATTTCGTCGAAGTTGTTGTtc > 2:556875/1‑34
CAGAGGCTGCGAGGATTTCGTCGAAGTTGTTGTACT < 1:381863/36‑1
AGAGGCTTCGAGGATTTCGTCGAAGTTGTTGTACTG < 2:284243/36‑1
GGCTTCGAGGATTTCGTCGAAGTTGTTGTACTGCAC < 2:314777/36‑1
GCTTCGAGGATTTCGTCGAAGTTGTTGTACTGCACC < 2:781527/36‑1
TTCGAGGATTTCGTCGAAGTTGTTGTACTGCACCCA > 2:544944/1‑36
CGAGGATTTCGTCGAAGTTGTTGTACTGCACCCATT < 2:968700/36‑1
GAGGATTTCGTCGAAGTTGTTGTACTGCACCCATTT > 2:589228/1‑36
AGGATTTCGTCGAAGTTGTTGTACTGCACCCATTTT < 1:817429/36‑1
AGGATTTCGTCGAAGTTGTTGTACTGCACCCACTTT > 2:762145/1‑36
TTCGTCGAAGTTGTTGTACTGCACCCATTTTGTTGG < 2:14550/36‑1
TTCGTCGAAGTTGTTGTACTGCACCCATTTTGTTGG < 2:649258/36‑1
TCGTCGAAGTTGTTGTACTGCACCCATTTTGTTGGA > 1:237377/1‑36
GTCGAAGTTGTTGTACTACACCCATTTTGTTGGACG > 1:428739/1‑36
TCGAAGTTGTTGTACTGCACCCATTTTGTTGGACGA > 1:703351/1‑36
CGAAGTTGTTGTACTGCACCCATTTTGTTGGACGAT > 1:669229/1‑36
GAAGTTGTTGTACTGCACCCATTTTGTTGGACGATG > 2:181002/1‑36
GTTGTACTGCACCCATTTTGTTGGACGATGAAATGG > 1:518720/1‑36
TGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:798407/1‑36
TGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 2:562385/1‑36
TGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:725966/36‑1
TGTACTGCACCCATTTTGTTGGACAATGAAATGGAA > 1:961481/1‑36
TGTACAGCACCCATTTTGTTGGACGATGAAATGGAA < 2:408006/36‑1
GTACTGCACCCATTTTGTTGGACGATGAAATGGAgt < 1:168861/36‑3
GTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:730833/36‑1
GTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 2:258912/1‑36
GTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 2:527704/1‑36

GCCGTCAGAGGCTTCGAGGATTTCGTCGAAGTTGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1733681‑1733645
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < NC_012967/2775875‑2775841

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.