New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	1821523 =	0 (0.000)	10 (1.130)	9/46	NT	100%	coding (577/1041 nt)	ynjI	DUF1266 domain‑containing protein
	?	NC_012967	= 2775875	NA (NA)					intergenic (‑45/+204)	ECB_RS25125/cysH	IS3 family transposase/phosphoadenosine phosphosulfate reductase

GTGCCTTAATGGAGCATTTTCTTTCTGGCGACCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/1821558‑1821523 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGCACCCATTTTGTTGGACGATGAAATGGA  <  NC_012967/2775875‑2775843                                                                       GTGCCTAAATGGAGCATTTTCTTTCTGGCGACCATG                                   <  2:696462/36‑1  TGCCTTAATGGAGCATTTTCTTTCTGGCGACCATGT                                  <  2:384198/36‑1  TGCCTTAATGGAGCATTTTCTTTCTGGCGACCATGT                                  <  1:477/36‑1    CCTTAATGGAGCATTTTCTTTCTGGCGACCATGTAC                                <  1:719203/36‑1       TAATGGAGCATTTTCTTTCTGGCGACCATGTACTGC                             >  1:621987/1‑36            GAGCATTTTCTTTCTGGCGACCATGTACTGCACCCA                        <  1:509459/36‑1                ATTTTCTTTCTGGCGACCATGTACTGCACCCATTTT                    >  2:862896/1‑36                 TTTTCTTTCTGGCGACCATGTACTGCACCCATTTTG                   <  1:943853/36‑1                 TTTTCTTTCTGGCGACCATGTACTGCACCCATTTTG                   <  2:639754/36‑1                   TTCTTTCTGGCGACCATGTACTGCACCCATTTTGTT                 >  2:454845/1‑36                     CTTTCTGGCGACCATGTACTGCACCCATTTTGTTGG               <  2:672536/36‑1                        TCTGGCGACCATGTACTGCACCCATTTTGTTGGACG            >  2:747815/1‑36                           GGCGACCATGTACTGCACCCATTTTGTTGGACGATG         >  1:231739/1‑36                             CGACCATGTACTGCACCCATTTTGTTGGACGATGAA       <  2:156332/36‑1                              GACCATGTACTGCACCCAGTTTGTTGGACGATGAAA      <  1:699940/36‑1                                 CATGTACTGCACCCATTTTGTTGGACGATGAAATGG   <  1:122046/36‑1                                  ATGTACTGCACCCATTTTGTTGGACGATGAAATGGA  <  1:190257/36‑1                                  ATGTACTGCACCCATTTTGTTGGACGATGAAATGGA  >  2:88995/1‑36                                                                       GTGCCTTAATGGAGCATTTTCTTTCTGGCGACCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/1821558‑1821523 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgTACTGCACCCATTTTGTTGGACGATGAAATGGA  <  NC_012967/2775875‑2775843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.