BRESEQ :: Evidence
New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 2774435 =NA (NA)8 (0.870) 7/48 NT 100% intergenic (‑67/+26) ECB_RS13765/ECB_RS25125 type I toxin‑antitoxin system Hok family toxin/IS3 family transposase
?NC_012967 = 3015774 0 (0.000)coding (1195/1677 nt) ECB_RS14885 polysaccharide export protein

CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/2774469‑2774435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGTGAGGCTTCCTCCAGCTTTTGCAGCGAGAGAT  <  NC_012967/3015774‑3015739
                                                                       
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA                                     >  1:263649/1‑36
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA                                     >  1:490564/1‑36
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAA                                     <  2:526166/36‑1
    TTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAGT                                 <  1:396217/36‑1
    TTTAACTGTCCAACTTTTTGGGGTCAGTACAAAAGT                                 >  2:289993/1‑36
     TTAACTGTCCAACTTTTTGGGGTCAGTACAAAAGTG                                <  1:577402/36‑1
       AACTGTCCAACTTTTTGGGGTCAGTACAAAAGTGAG                              >  2:231592/1‑36
         CTGTCCAACTTTTTGGGGTCAGTACAAAAGTGAGGC                            <  1:544242/36‑1
          TGTCCAACTTGTTGGGGTCAGTACAAAAGTGAGGCT                           <  1:848799/36‑1
            TCCAACGTTTTGGGGTCAGTACAAAAGTGAGGCTTC                         <  2:756664/36‑1
                       GGGGTCAGTACAAAAGTGAGGCTTCCTCCAGCTctt              >  1:652336/1‑33
                       GGGGTCAGTACAAAAGTGAGGCTTCATCCAGCTTTT              >  1:681680/1‑36
                         GGTCAGTACAAAAGTGAGGCTTCCTCCAGCTTTTGC            >  1:676952/1‑36
                            CAGTACAAAAGTGAGGCTTCCTCCAGCTTTTGCAGC         <  2:127834/36‑1
                                ACAAAAGTGAGGCTTCCTCCAGCTTTTGCAGCGAGA     <  2:372091/36‑1
                                 CAAAAGTGAGGCTTCCTCCAGCTTTTGCAGCGAGAG    <  2:328517/36‑1
                                   AAAGTGAGGCTTCCTCCAGCTTTTGCAGCGAGAGAT  >  1:188746/1‑36
                                                                       
CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAa‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/2774469‑2774435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGTGAGGCTTCCTCCAGCTTTTGCAGCGAGAGAT  <  NC_012967/3015774‑3015739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.