New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	= 2775875	NA (NA)	9 (1.020)	7/46	NT	100%	intergenic (‑45/+204)	ECB_RS25125/cysH	IS3 family transposase/phosphoadenosine phosphosulfate reductase
	?	NC_012967	3015769 =	0 (0.000)					coding (1190/1677 nt)	ECB_RS14885	polysaccharide export protein

CATCGTCCAACAAAATGGGTGCAGTAca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/2775850‑2775875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG  >  NC_012967/3015769‑3015805                                                                 CATCGTCCAACAAAATGGGTGCAGTACACTTTCTGC                             >  1:791289/1‑36      TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGT                        <  1:312984/36‑1          ACAAAATTGGTGCAGTACACTTTCTGCCCAGTCATC                    <  2:173679/36‑1            AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCA                  >  1:26606/1‑36                TGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAA              <  2:430658/36‑1                 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA             <  1:892269/36‑1                  GGTGCAGTACACTTTCTGCCCAGTCATCCACCAAcg            >  1:455081/1‑34                   GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA           >  1:764288/1‑36                   GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGA           >  1:289823/1‑36                      CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGA        <  1:91716/36‑1                      CAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGA        >  2:411315/1‑36                           CACTTTCTGCCCAGTCATCCACCAAAGACGAAGCCA   >  2:796419/1‑36                            ACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG  <  1:77937/36‑1                                                                 CATCGTCCAACAAAATGGGTGCAGTAca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/2775850‑2775875 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAG  >  NC_012967/3015769‑3015805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.