New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	664690 =	NA (NA)	11 (1.240)	9/46	NT	100%	intergenic (‑3/‑45)	gltL/ECB_RS24860	glutamate/aspartate ABC transporter ATP‑binding protein GltL/IS3 family transposase
	?	NC_012967	1270658 =	0 (0.000)					intergenic (‑165/+240)	ECB_RS06335/chaA	type I toxin‑antitoxin system toxin Ldr family protein/sodium‑potassium/proton antiporter ChaA

TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/664723‑664690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGATAATTCCGGCTTGGTGTGGATACT  >  NC_012967/1270658‑1270688                                                                   TTCCATTTCATCGTCCAACAAAATGGGTGCAGAACA                               >  2:212809/1‑36   CCATTTCATCGTCCAACAAAATGGGTGCAGTACACC                             <  1:821615/36‑1    CATTTCATCGTCCAACAAAATGGGTGCAGTACACCG                            <  2:228395/36‑1    CATTTCATCGTCCAACAAAATGGGTGCAGTACACCG                            >  1:834961/1‑36             GTCCAACAAAATGGGTGCAGTACACCGGATAATTCC                   <  1:527493/36‑1              TCCAACAAAATGGGTGCAGTACACCGGATAATTCCG                  <  1:333542/36‑1                  ACAAAATGGGTGCAGTACACCGGATAATTTCGGCTT              >  1:737801/1‑36                     AAATGGGTGCAGTACACCGGATAATTCCGGCTTGGT           <  2:604768/36‑1                     AAATGGGTGCAGTACACCGGATAATTCCGGCTTGGT           <  1:344623/36‑1                     AAATGGGTGCAGTACACCGGATAATTCCGGCTTGGT           >  2:165659/1‑36                      AATGGGTGCAGTACACCGGATAATTCCGGCTTGGTG          >  1:915287/1‑36                       ATGGGTGCAGTACACCGGATAATTCCGGCTTGGTct         >  1:102094/1‑34                       ATGGGTGCAGTACACCGGATAATTCCGGCTTGGTGT         <  1:231710/36‑1                         GGGTGCGGTACACCGGATAATTCCGGCTTGGTGTGG       <  1:990305/36‑1                            TGCAGTACACCGGATAATTCCGGCTTGGTGTGGATA    >  2:577497/1‑36                              CAGTACACCGGATAATTCCGGCTTGGTGTGGATAat  >  1:771532/1‑34                                                                   TTCCATTTCATCGTCCAACAAAATGGGTGCAGTAca‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_012967/664723‑664690 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGGATAATTCCGGCTTGGTGTGGATACT  >  NC_012967/1270658‑1270688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.