| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 664690 = | NA (NA) | 11 (1.240) | 9/46 | NT | 100% | intergenic (‑3/‑45) | gltL/ECB_RS24860 | glutamate/aspartate ABC transporter ATP‑binding protein GltL/IS3 family transposase |
| ? | NC_012967 | 1270658 = | 0 (0.000) | intergenic (‑165/+240) | ECB_RS06335/chaA | type I toxin‑antitoxin system toxin Ldr family protein/sodium‑potassium/proton antiporter ChaA | |||||
AGCAGAAAGCCCGACACGCTCCAGCAGTTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > NC_012967/664658‑664719 | aGCAGAAAGCCCGACACGCTCCAGCAGTTTTGTatt > 1:215942/1‑34 (MQ=255) aGAAAGCCCGACACGCTCCAGCAGTTTTGTACTGCa < 2:51556/36‑1 (MQ=255) aaGCCCGACACGCTCCAGCAGTTTTGTACTGCAccc > 2:516244/1‑36 (MQ=255) cccGACACGCTCCAGCAGTTTTGTACTGCACCCAtt > 2:396132/1‑36 (MQ=255) ctgACACGCTCCAGCAGTTTTGTACTGCACCCAttt < 1:430434/34‑1 (MQ=255) acacGCTCCAGCAGTTTTGTACTGCACCCATTttgt > 2:499266/1‑36 (MQ=255) cacGCTCCAGCAGTTTTGTACTGCACCCATTttgtt > 2:70738/1‑36 (MQ=255) gCTCCAGCAGTTTTGTACTGCACCCATTTTGTTGGa > 2:467295/1‑36 (MQ=255) gcagTTTTGTACTGCACCCATTTTGTTGGACGATGa > 2:366822/1‑36 (MQ=255) cagTTTTGTACTGCACCCATTTTGTTGGACGATGaa < 2:340338/36‑1 (MQ=255) gTTTTGTACTGCACCCATTTTGTTGGACGATGAAAt > 1:338508/1‑36 (MQ=40) | AGCAGAAAGCCCGACACGCTCCAGCAGTTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > NC_012967/664658‑664719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |