New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_012967	664690 =	NA (NA)	11 (1.240)	9/46	NT	100%	intergenic (‑3/‑45)	gltL/ECB_RS24860	glutamate/aspartate ABC transporter ATP‑binding protein GltL/IS3 family transposase
	?	NC_012967	1270658 =	0 (0.000)					intergenic (‑165/+240)	ECB_RS06335/chaA	type I toxin‑antitoxin system toxin Ldr family protein/sodium‑potassium/proton antiporter ChaA

CCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAATTCCGGCTTGGTGTGGATACT  >  NC_012967/1270624‑1270688                                   |                               ttccatttcatcgtccaacaaaatgggtgcagaaca                               >  2:212809‑M2/35‑36 (MQ=255)   ccatttcatcgtccaacaaaatgggtgcagtaCAcc                             <  1:821615‑M2/4‑1 (MQ=255)    catttcatcgtccaacaaaatgggtgcagtaCACCg                            <  2:228395‑M2/5‑1 (MQ=255)    catttcatcgtccaacaaaatgggtgcagtaCACCg                            >  1:834961‑M2/32‑36 (MQ=255)             gtccaacaaaatgggtgcagtaCACCGGATAATTcc                   <  1:527493‑M2/14‑1 (MQ=255)              tccaacaaaatgggtgcagtaCACCGGATAATTCCg                  <  1:333542‑M2/15‑1 (MQ=255)                  acaaaatgggtgcagtaCACCGGATAATTTCGGCtt              >  1:737801‑M2/18‑36 (MQ=255)                     aaatgggtgcagtaCACCGGATAATTCCGGCTTGgt           <  2:604768‑M2/22‑1 (MQ=255)                     aaatgggtgcagtaCACCGGATAATTCCGGCTTGgt           <  1:344623‑M2/22‑1 (MQ=255)                     aaatgggtgcagtaCACCGGATAATTCCGGCTTGgt           >  2:165659‑M2/15‑36 (MQ=255)                      aatgggtgcagtaCACCGGATAATTCCGGCTTGgtg          >  1:915287‑M2/14‑36 (MQ=255)                       atgggtgcagtaCACCGGATAATTCCGGCTtggtct         >  1:102094‑M2/13‑34 (MQ=255)                       atgggtgcagtaCACCGGATAATTCCGGCTTGgtgt         <  1:231710‑M2/24‑1 (MQ=255)                         gggtgcggtaCACCGGATAATTCCGGCTTGGTGTgg       <  1:990305‑M2/26‑1 (MQ=255)                            tgcagtaCACCGGATAATTCCGGCTTGGTGTGGAta    >  2:577497‑M2/8‑36 (MQ=255)                              cagtaCACCGGATAATTCCGGCTTGGTGTGgataat  >  1:771532‑M2/6‑34 (MQ=255)                                   |                               CCACCAGGGATAAAGCCCCCGCAACATTGCGCCTCACCGGATAATTCCGGCTTGGTGTGGATACT  >  NC_012967/1270624‑1270688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.