BRESEQ :: Evidence
New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 = 17336490 (0.000)7 (0.730) 7/50 NT 100% coding (685/1413 nt) pykF pyruvate kinase PykF
?NC_012967 2774435 = NA (NA)intergenic (‑67/+26) ECB_RS13765/ECB_RS25125 type I toxin‑antitoxin system Hok family toxin/IS3 family transposase

TCCAAAATCGAAAACCAGGAAGGCCTCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/1733619‑1733649
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  NC_012967/2774435‑2774469
                                                                  
TCCAAAATCGAAAACCAGGAAGGCCTCAACATGTAC                                >  1:802586/1‑36
 CCAAAATCGAAAACCAGGAAGGCCTCAACATGTACT                               >  2:988009/1‑36
     AATCGAAAACCAGGAAGGCCTCAACATGTACTGACC                           >  2:429035/1‑36
      ATCGAAAACCAGGAAGGCCTCAACATGTACTGACCC                          <  1:691462/36‑1
          AAAACCAGGAAGGCCTCAACATGTACTGACCCCAAA                      <  2:323199/36‑1
                AGGAGGGCCTCAACATGTACTGACCCCAAAAAGTTG                <  1:589780/36‑1
                AGGAAGGTCTCAACATGTACTGACACCAAAAAGTTG                >  2:279697/1‑36
                 GGAAGGCCTCAACATGTACTGACCCCAAAAAGTTGG               <  1:651316/36‑1
                              ATGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  2:632853/1‑36
                                                                  
TCCAAAATCGAAAACCAGGAAGGCCTCAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/1733619‑1733649
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  NC_012967/2774435‑2774469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.