BRESEQ :: Evidence
New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_012967 = 18215280 (0.000)7 (0.760) 6/48 NT 100% coding (572/1041 nt) ynjI DUF1266 domain‑containing protein
?NC_012967 2774436 = NA (NA)intergenic (‑68/+25) ECB_RS13765/ECB_RS25125 type I toxin‑antitoxin system Hok family toxin/IS3 family transposase

CTCCATGTTTGCTTTAAAGGTATTGGCTCCATGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/1821494‑1821528
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  NC_012967/2774436‑2774470
                                                                      
CTCCATGTTTGCTTTGAAGGTATTGGCTCCATGGTG                                    <  1:513012/36‑1
       TTTGCTTTAAAGGTATTGGCTCCATGGTGTACTGtc                             >  1:532498/1‑34
        TTGCTTTAAAGGTATTGGCTCCATGGTGTACTGACC                            <  1:224650/36‑1
               AAAGGTATTGGCTCCATGGTGTACTGACCCCATAAA                     >  2:34333/1‑36
                   GTATTGGCTCCATGGTGTACTGACCCCAAAAAGTTG                 <  1:537083/36‑1
                        GGCTCCATGGTGTACTGACCCCAAAAAGTTGGACAG            >  2:934353/1‑36
                         GCTCCATGGTGTACTGACCCCAAAAAGTTGGACAGT           >  1:680187/1‑36
                            CCATGGTGTACTGACCCCAAAAAGTTGGACAGTTAA        >  2:157284/1‑36
                              ATGGTGTACTGACCCCAAAAAGTTGGACAGTTAAAC      <  1:478875/36‑1
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  <  1:728909/36‑1
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  1:844983/1‑36
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  <  1:598790/36‑1
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  1:46213/1‑36
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  <  2:562151/36‑1
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  2:617478/1‑36
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  2:675070/1‑36
                                  TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  <  1:541234/36‑1
                                                                      
CTCCATGTTTGCTTTAAAGGTATTGGCTCCATGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_012967/1821494‑1821528
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tGTACTGACCCCAAAAAGTTGGACAGTTAAACACGA  >  NC_012967/2774436‑2774470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.