| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3630716 | NA (NA) | 11 (1.140) | 9/50 | NT | NA | intergenic (‑171/‑305) | ECB_RS25605/yhjV | type I toxin‑antitoxin system toxin Ldr family protein/amino acid permease |
| ? | NC_012967 | = 3652533 | NA (NA) | intergenic (+26/+253) | ECB_RS25190/glyS | IS3 family transposase/glycine‑‑tRNA ligase subunit beta | |||||
GGGATAAAGCCCCCGCAACATTGCGCCTCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3630683‑3630716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < NC_012967/3652533‑3652499 GGGATAAAGCCCCCGCAACATTGCGCCTCACCGGTG < 2:616154/36‑1GGGATAAAGCCCCCGCAACATTGCGCCTCACCGGTG > 2:736525/1‑36 GATAAAGCCCCCGCAACCTTGCGCCTCACCGGTact > 2:518654/1‑33 ATAAAGCCCCCGCAACATTGCGCCTCACCGGTGTAC < 1:960335/36‑1 AAAGCCCCCGCAACATTGCGCCTCACCGGTGTACTG < 2:221765/36‑1 CCCCGCAACATTGCGCCTCACCGGTGTACTGACCCC > 1:309842/1‑36 CCGCAACATTGCGCCTCACCGGTGTACTGACCCCAA < 1:214556/36‑1 ACATTGCGCCTCACCGGTGTACTGACCCCAAAAAGT > 2:942818/1‑36 ATTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTG < 1:901504/36‑1 TTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGG > 2:942286/1‑36 TTGCGCCTCACCGGTGTACTGACCCCAAAAAGTTGG > 1:716413/1‑36 CGCCTCACCGGTGTACTGACCCCGAAAAGTTGGACA > 2:338778/1‑36 CGCCTCACCGGTGTACTGACCCCAAAAAGTTGGACA > 2:526839/1‑36 CCTCACCGGTGTACTGACCCCAAAAAGTTGGACAGT > 1:981675/1‑36 CTCACCGGTGTACTGACCCCAAAAAGTTGGACAGTT > 1:90138/1‑36 CGGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA < 1:828944/36‑1 CGGTGTACTGACCCCAAAAAGTTGGACAGTTAAACA > 1:680272/1‑36 GGTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC > 2:685268/1‑36 GTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < 2:744703/36‑1 GTGTACTCACCCCAAAAAGTTGGACAGTTAAACACG > 2:781825/1‑36 GGGATAAAGCCCCCGCAACATTGCGCCTCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_012967/3630683‑3630716‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACG < NC_012967/3652533‑3652499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |