New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_012967 | = 3630716 | NA (NA) | 11 (1.140) | 9/50 | NT | NA | intergenic (‑171/‑305) | ECB_RS25605/yhjV | type I toxin‑antitoxin system toxin Ldr family protein/amino acid permease |
? | NC_012967 | = 3652533 | NA (NA) | intergenic (+26/+253) | ECB_RS25190/glyS | IS3 family transposase/glycine‑‑tRNA ligase subunit beta |
CCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATT > NC_012967/3630713‑3630748 | ccGGAACCTTTCCGGCTTGCCGCTGATTCTACTAtt > 1:205171/1‑36 (MQ=255) | CCGGAACCTTTCCGGCTTGCCGCTGATTCTACGATT > NC_012967/3630713‑3630748 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 4 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |